bito

Python interface to bito.

Functions

ratio_gradient_of_height_gradient(arg0, …)

Obtain a ratio gradient from a height gradient.

Classes

PSPIndexer

The primary split pair indexer.

PhyloGradient

A phylogenetic gradient.

PhyloModelSpecification(self, substitution, …)

Phylogenetic model specification.

PreRootedSBNInstance

PreUnrootedSBNInstance

RootedTree

A rooted tree with branch lengths.

RootedTreeCollection(*args, **kwargs)

A collection of rooted trees.

UnrootedTree

An unrooted tree with branch lengths.

UnrootedTreeCollection(*args, **kwargs)

A collection of unrooted trees.

gp_instance(self, arg0)

A generalized pruning instance.

ostream_redirect(self, stdout, stderr)

rooted_instance(self, arg0)

A rooted SBN instance.

unrooted_instance(self, arg0)

A unrooted SBN instance.

vector_double

A wrapper for vector<double>.